sc_reconstruction.metrics.load_cell_cycle_genes

sc_reconstruction.metrics.load_cell_cycle_genes(path)

Load S-phase and G2M-phase gene lists from the Regev-lab text file.

The two lists are those of [Tirosh et al., 2016]. Format: one gene symbol per line, first 43 are S-phase, the rest are G2M. The file ships with the paper artefacts at analysis/data/frozen/regev_lab_cell_cycle_genes.txt.

Parameters:

path (str | Path)

Return type:

tuple[list[str], list[str]]