utils

Helpers for reading zarr-backed expression matrices, resolving model checkpoints from Hydra runs, and assembling per-paper sweep paths.

• sc_reconstruction.utils.transform_to_csr
• sc_reconstruction.utils.get_zarr_attr
• sc_reconstruction.utils.split_zarr_dataloader
• sc_reconstruction.utils.filter_genes
• sc_reconstruction.utils.parse_model_params_from_filename
• sc_reconstruction.utils.get_model_class_from_name
• sc_reconstruction.utils.inst_model_from_checkpoint
• sc_reconstruction.utils.create_model_from_cfg
• sc_reconstruction.utils.read_csv_pandas_flexible
• sc_reconstruction.utils.find_model_paths
• sc_reconstruction.utils.sample_list